Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813178.1_cds_XP_016497448.1_11571
CDS Infomation

[gene=LOC107816263] [db_xref=GeneID:107816263] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016497448.1] [location=complement(join(1836..2450,2579..3535))] [gbkey=CDS]
Sequence

ATGTATCTCCATAATATAATATACGATCCTTTCCTATCTGAAATGGAGGCAAAACATTTA
TCTTCCATCTTCATTTCAGTCTTGATATTCGTATCCTTCATCTTTCGTTTAGTTCAGATA
TGGAAGGCATCAAAAACCTTTAACAAAATATTGCCTCCAGGGCCATGGAGTCCACCTTTG
ATTGGGAACTTGCACCTATTTATGAATGGCCGCCTTCCAGTACATCATACTCTCAGAAGT
CTATCGCGAAGATACGGGCCAATCTTTCACTTACGTCTTGGAGAAATATCGATCATTGTT
GTATCTTCACCTGAGATGGCAAAAGAAATTATGAAAACTCAAGACCTTCGCTTTGCTACT
AGGCCTGAATTTATGGCCGGAGATATTATTTTCTACAACTACACAGACATTATAACTTGT
CCATATGGTGATCACTGGAGAAATATGCGCAAAGTGTGCATCGTGGAACTTCTTAGCGCA
AAGATGGTCAAGTCATTTAATTCAATTCGACAAGCACAGATGTCAAGTCTCATTTCATCC
GTTAACTCCATGCCTGATGACTCATTGATTAACTTATCAGACAAAATGTTTTGGTTTACA
AGTTCAGTAACTTGTAGGTCAGCTTTCGGGAAAGTGATTCATGATCAAGATAAGTTGATA
ATGTTGGTGAAGGACATATCATCATTAGCTGCAGGATTTGACTTGGCTGATATGTTCCCT
TCCCGAAAATGGCTTCACAAGATTACTGGATTGAAGTCCAAAATGTTGAAGGTTCACAAA
AAGGTAGATGCAATTTTGGAGAATATCCTTAATGAGCATCAGGAAAGTCGAGCTAACGGA
AAGAAGAGCAATGGTGAGACTGGAGGTGAAGATTTGATCGATGTTCTACTTCGAGTCATG
GAGAGTGGCGAATTGGGAACTCCAATCACAAATGAGAATATCAAAAGTGTTATTTTTGAC
ATGTTCTTAGCAGGAGCTGAAACCTCAGCTACAACAATTATTTGGGCTTTGGCTGAAATG
ATAAGAAATCCAAGTGTTATGGCTAAAGCACAACTTGAAGTTAGAGAAGTCCTAAAAGGA
AAGAGAACATTTGAGGATATTGATCTAGAAGAGTTGAAGTATCTAAACCTAGTGATTAAA
GAAACATTAAGGTTGCACCCTCCTGTTCCTCTATTAATCCCAAGGGAATGCAGAGAAGAA
ACAAAAATTGACAAATATATAATACCCATCAAAACTAGAGTTCTGGTGAATGTATGGGCA
ATTGGAAGAGAATCTACAAATTGGCATAATCCGGAAAGTTTTATACCTGAGAGATTTGAG
AATAATTCTATTGATTTCAGAGGAAACCACTTTGAATTTATTCCGTTTGGTGCAGGAAGA
AGAATGTGTCCGGGACTGTTATTTGGTTTAGTTAATGTCGGACATCCTTTAGCTCAACTG
CTTTATCACTTCGACTGGAAGACTCCTCATGGAATTGCTCCAGACAATTTAAATATGACC
GAAACAATTGGGGTAGCTGGCGGAAGAAAGGATGATCTTTGTTTAATTGCTACTCCTTTT
GGTCTCTCTTAA

Peptide Sequence

PEP ID

XP_016497448.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MYLHNIIYDPFLSEMEAKHLSSIFISVLIFVSFIFRLVQIWKASKTFNKILPPGPWSPPL
IGNLHLFMNGRLPVHHTLRSLSRRYGPIFHLRLGEISIIVVSSPEMAKEIMKTQDLRFAT
RPEFMAGDIIFYNYTDIITCPYGDHWRNMRKVCIVELLSAKMVKSFNSIRQAQMSSLISS
VNSMPDDSLINLSDKMFWFTSSVTCRSAFGKVIHDQDKLIMLVKDISSLAAGFDLADMFP
SRKWLHKITGLKSKMLKVHKKVDAILENILNEHQESRANGKKSNGETGGEDLIDVLLRVM
ESGELGTPITNENIKSVIFDMFLAGAETSATTIIWALAEMIRNPSVMAKAQLEVREVLKG
KRTFEDIDLEELKYLNLVIKETLRLHPPVPLLIPRECREETKIDKYIIPIKTRVLVNVWA
IGRESTNWHNPESFIPERFENNSIDFRGNHFEFIPFGAGRRMCPGLLFGLVNVGHPLAQL
LYHFDWKTPHGIAPDNLNMTETIGVAGGRKDDLCLIATPFGLS

Transcript Sequence

Gene sequence data has not been registered.